ALL AML dataset "Gene accession number"
As an exercise I am trying to analyse the ALL-AML dataset
In the column "Gene accession number" are entries like
AB000450_at
When I search genbank nothing is returned. When I search ncbi all databases I get hits in GEO profiles. What are those identifiers and where do they come from?
• 1,015 views
•
link
updated
by
GenoMax
•
written
by
hansrupp •
•
written
by
hansrupp •
1 answer
Those are Affymetrix identifiers. You can find information about them in the data table for the array in question (scroll down until you see the table) : https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL80
AB000450_at AB000450 Homo sapiens Oct 6, 2014 Exemplar sequence GenBank AB000450, class A, 20 probes, 20 in AB000450 1298-1730, Human mRNA for VRK2, complete cds
Log in to answer this question.
More posts like this
-
Querying on non-canonical bacterial IDs
written by benjamin.kellman •
-
Ensembl stable ID cross-references
written by J •
-
Downloading Batch Entrez Protien Information
written by Andrew •
-
Fetching Genbank Assembly IDs with protein
written by anabaena •
-
Retrieve genbank viral genomes
written by erwan.scaon
-
Go annotation/ Blast2GO: Why can RefSeq mRNA accession numbers not be associated with GO terms?
written by belinda-k •
-
What are the unique IDs for NCBI sequence records (Entrez/Genbank/Refseq)?
written by mjlumpe •
-
How to get subset from NCBI databases using Accession/GI
written by mschmid
-
Searching Or Filtering Ncbi Entrez Results For A Keyword Only In Annotated Features
written by Bach •
-
How Can I Download The Results From An Ncbi Blast Search?
written by John
