gsea msigdb RNA-seq input file

Hi all, I am trying to do GSEA but I couldn't understand the input file format that is described in the guide. I analyzed my results with EdgeR btw. My results' are shown like below.

enter image description here

gsea rna-seq msigdb

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written 4.2 years ago by biology_inform 6

What guide are you referring to specifically? There are a few popular implementations of GSEA.

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written 4.2 years ago by rpolicastro 1.3K

https://www.gsea-msigdb.org/gsea/doc/GSEAUserGuideFrame.html

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written 4.2 years ago by biology_inform 6

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