Comparing tpm/FKMP values form RNAseq with values from MS-Proteomics
Hi there,
does anyone now if there is a way to quantitativly compare tpm/FKMP values form RNAseq with values from MS-Proteomics? I am using multiply databases, including PAX which uses MS to analyse the abundance of proteins in a given tissue, and GTEx which uses RNAseq and so gives me tpm/FKMP values to estimate expression of a given protein in a given tissue. Is there any (automated ?) way to compare these numbers?
Best regards
Natan
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