RNAseq on dataset containing RPKM
Given RNAseq datasets containing only RPKM values with no informations on sequencing depth, are there options other than Limma for doing differential expression analysis between different conditions ? If there are any, which one should one use under what assumptions ?
Thanks.
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iibrams07 •
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https://support.bioconductor.org/p/98820/#98875
RPKM=TPM in this context.