How to generate Metaassembly for a genome?

Hi,

I had a 7 different genomes (fish) with 40X genome coverage, sequenced by Nextseq-500.

I used 3 de novo assemblers (Abyss(21,33,44,77), Spades(21,33,44,77), Velvet(31)) for assembly with different kmers.
Removed the redundant contigs using CD-HIT.
Can I used the Metassembler for merging the denovo assemblies ?

Suggestions.

genome gene

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written 4.3 years ago by sunnykevin97

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