How to predict oriC in bacterial genomes?
Hi,
I'm working on a project that is observing the distance between certain genes to the oriC across hundreds of bacterial species. We are currently using the DoriC database (http://tubic.tju.edu.cn/doric/public/index.php/index) to get the oriC info, but we want to get rid of this dependency and predict the locations of oriC ourselves. The tools and links provided by the DoriC team are all horribly outdated and not maintained at all. They are using ori-Finder 1 to predict everything and save it to DoriC, but this tool gives me an error any time I try it myself.
Is there any other known method or tool I can use to predict bacterial oriC?
Thanks!
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