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How to interpret NMF clustering results

Hi all! I'm trying to use NMF clustering on some RNA seq data hoping to find subgroups of samples. I'm using the NMF package in R: res = nmf(mat, rank= 2) w = basis(res) h = coef(res) However I'm not sure how to interpret the results using h matrix. I would like to see each samples being labelled as either cluster 1 or 2. Any help is appreciated! Thanks in advance!

clustering nmf

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