Get absolute abundance of all ARGs from multiple samples
I have whole metagenome samples and I want to count absolute abundance of ARG's , I used rgi RGI for it but m not sure if it gives absolute abundance.. if yes, then how can I merge multiple sample outputs ?
Hello, I am currently working with shotgun metagenomic sequencing data, and I aim to construct a co-occurrence network. I used SparCC (Sparse Correlations for Compositional …
Due to poor coverage we have co assembled within individuals (multiple samples per individual) across time points. We then want to look at the CAZYme …
Hello everyone, I wanted to merge vcf files using bcftools merge --file-list sample_list.txt -O v -o merge.vcf But it gives an error for sample16.vcf.gz Error: …
Hi, We performed shotgun metagenomics for dozens of stool samples. Next, we assembled the reads into contigs and binned the contigs to reconstruct the genomes. …