d-statistics admixtools2
Hello!
I compute d-statistics via admixtools 2 but the columns that I got are a little confusing. Please, help me with distinguishing the columns' names
example of output:
pop1 pop2 pop3 pop4 est se z p n
8.4.BGI.WG.01x.imputed African_Caribbean African_Caribbean Yoruba 0.006040536195655065 1.2827474264477063e-4 47.09061247063293 0 151939
1 answer
pop1:4 is the population names for the different populations in the f_4 test. est is the estimated f_4 statistic, se is the standard error of the statistic, z is the z-score (number of standard deviations the test statistic is from the mean), p is the equivalent p-value for the test statistic being different to zero and n is the number of SNPs tested.
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