Match colData and countsData for DESeq2
Hi all, I want to analyze differential expression in a large set of RNA-seq data in R. I have colData with patient info, 3069 patients, and countsdata with 3400 patients and 30k genes.
all(rownames(ColData) %in% colnames(GeneData)) [1] FALSE
all(rownames(ColData) == colnames(GeneData)) [1] FALSE
rownames and colnames do not match. What code can I use to make them match, and remove those which do not match ?
Thank you in advance!
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