I have Microbiota abundance data (at many taxonomic levels) of a group of rats from an experiment and Metabolome data of the same rats. I want to make a map that correlates a family/genus of bacteria with the increase or decrease of a particular metabolite.
Examples of the tables of information that I have.
I have an abundance table of family or genus level. I have an metabolome batch normalized data of the rats plasma and feces samples.
And also, this rats are divided in four groups.
I have been looking at many softwares, approaches, publications but I have not found one that suits my data and what I want to obtain.
If anyone has any tutorial or method that I can apply, I would appreciate it.
0 answers
No answers yet.
Log in to answer this question.
-
Chip Seq Analysis of RNA Polymerase 2
written by Gaurav •
-
How to do preprocessing from fastqc
written by Lulu •
-
Consistent cluster coloring
written by solo.albif •
-
nanopore data analysis methylation modification
written by Domi •
-
How Can I move the scattered dots more closer into the center of box ?
written by ohtang7 •
-
Making multiple box plots with relative abundance in R
written by ohtang7 •
-
Average identity of protein multiple alignment
written by Xylanaser
-
Why my `Percent duplicates` in a shallow sequencing is too high?
written by 631079064 •
-
The species information of the sequencing sequence is incorrect
written by 1437310205 •
-
Is the current R version (4.1.2) are not suitable for the packages related with TCGA
written by nonaddldy •
