STAR genomeSAindexNbases

Hello everyone!

what is the exact meaning of the parameter genomeSAindexNbases which is used for building genome index by STAR? (the mannual says For small genomes, the parameter --genomeSAindexNbases must to be scaled down)

Thanks a lot!

Pei

rna-seq star mapping

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written 4.8 years ago by Pei

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