What is the best program or way to solve undefined protein subcellular localizations?
Hi, I'm analyzing the subcellular localization of the proteins of a constructed pangenoma, using Cello 2.5 and PSORTB.I wanted to ask for some advice to further refine the output of each program and reach a consensus since I'm analyzing a pangenome with 4800 proteins with PSORTB and I get 1900 proteins whose subcellular localization is undefined. Is there any other program to analyze this? Any advice?
1 answer
Several methods I have tried before:
- http://busca.biocomp.unibo.it/
- http://www.csbio.sjtu.edu.cn/bioinf/Cell-PLoc-2/
- http://www.cbs.dtu.dk/services/SignalP/
- https://rostlab.org/services/loctree3/
A long list:
• 0 views
•
link
written
by
Mensur Dlakic
Log in to answer this question.
More posts like this
