Yeah, the overall appearance looks like UCSC. If you want to automate things starting from bigwig files you might be interested in https://github.com/PoisonAlien/trackplot which does these kinds of coverage plots, fully in R with options to highlight and customize. trackplot: Fast and minimal dependency standalone R script to generate IGV style locus tracks from bigWig files
Chipseq visualization how to draw the figure
Dose anybody know how to draw the figure using Chpseq data？ Any guidance would be appreciated ！
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This looks like a UCSC genome browser screen shot. To do this 1) Convert your mapped BAM file into bigwig format. Use deeptools to convert bigwig file 2) Then upload your wig file on UCSC genome browser and then you can get such plots.
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Chirag Nepal
thanks! it helps me a lot
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Binghong •
thanks! it helps me a lot
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Binghong •
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