Dear All, After performing hmmsearch, there is a line representing the posterior probability (PP) of each aligned residue in the alignment section. I'd like to …

Hi! I have a sequence of a scFv. I want to generate a representative 3D structure. If I try to find a structure using Alfafold …

I used rMATS tools on my nam files and now have a list of retained introns with their upstreamEE and downstreamES information and geneID information. …

I want to convert given bond angles, bond lengths and Ramachandran angles to cartesian coordinates for a given sequence of an amino acid (or for …

Hi everyone, I need suggestion from you all. I have performed MD simulation of predicted protein with the help of GROMACS. After completing the simulation, …

Hello, I have 11 proteins in two datasets: with 5 in 1st and 6 in 2nd dataset. I have calculated the amino acid percentage for …

Hi, I used Swiss pdb viewer to mutate three polar amino acids in the contact surface of two proteins. First these amino acids are mutated …

Hi, I am doing a bioinformatics project. Now, I get the thousands of insertion deletion SNPs. All of the SNPs are in the coding region. …

<p>Hi Biostars!</p> <p>How can we validate a nucleic structure model using any bioinformatics tool? as in case of protein we use ramachandran plot to validate …

<p>Hi all I have recently started a training in homology modeling using modeller, I modelled a protein structure and performed model validation through SAVES , …