How do I predict HLA's haplotype from WES data?
Hi, I'm trying to do HLA typing using WES data.
I used HLAminer to predict HLA type.
But it seems that HLAminer's results don't have haplotype information.
What should I do to check haplotype of HLA?
• 1,131 views
•
link
written
by
kwanghoon •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
vcf procesing for ML antigen prediction
written by Javier •
-
How to search whole exome vcf file for haplotype
written by Marconi •
-
Advantages of split by chromosome?
written by kwanghoon •
-
About GATK4 Mutect2 runtime (Whole Exome seq)
written by kwanghoon •
-
TCGA CNV data 1p/19q codeletion (whole arm deletion)
written by kwanghoon •
-
HLA typing for cancers/neoantigen identification
written by TLOA3 •
-
HLAminer RNA-seq vs Whole exome seq
written by oghzzang •
-
HLAminer problem with output file
written by reui879 •
-
What HLA tool for commercial usage?
written by agata88
-
Fasta Sequence For Each Hla Alleles
written by J.F.Jiang
