This is a test version of Biostars. For the public version, visit https://www.biostars.org.
downloading manifest files on TCGA GDC

I want to download manifest files from TCGA GDC. However, they use reference build GRCh38 for example look at that link below:

Example

I want to download manifest files for reference build hg19. How can I do that? Insights will be appreciated.

tcga

If they are available then they would likely be at the legacy GDC.

Thank you for you reply. Yes I figured that out too. But legacy GDC won't let me enter a list barcodes unlike the current GDC. I will just liftover instead.

0 answers

No answers yet.

Log in to answer this question.