Hi everyone,

I ran plink on 1000G phase 3 GRCh38 genotype files and merged bed, bim and fam files of all chromosomes. Now, I need to subset these files based on EUR participant IDs in 1KG phase 3 data. Here is the command I will use:

plink  --bfile /data/1KG_phase3/GRCh38/plink/1KG_phase3_GRCh38_allchr \
         --keep /data/1KG_phase3/GRCh38/plink/eur_subsets/1KG_phase3_European_samples.txt \
         --make-bed \
         --out /data/1KG_phase3/GRCh38/plink/eur_subsets/1KG_phase3_GRCh38_EUR_allchr

However, I was wondering where/how to get the 1KG_phase3_European_samples.txt file, which should include 1KG Phase 3 EUR-nonFIN FamilyIDs and IndividualIDs based on this post.

Thanks a lot!