Hi, All..

I have a question related to "ERANGE" for RNA-seq analysis. I got an empty file after running the "getsplicefa.py" script..

the result is as following:

psyco not running

getsplicefa: version 1.1

72408

659533

10002 genes

20003 genes

30004 genes

40005 genes

50006 genes

60007 genes

70008 genes

6487 splices too short to be seen

15287 splices will be under-reported

And my command is :

$python erange-4522d28/getsplicefa.py hsapiens knownGene.txt hg19splice76.fa 72

Any reply will be thankful.