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How To Make Cytoscape Export Network In Cluster Format (Non-Sif)
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16 months ago
gundalav • 270
La La Land

SIF format reports the network in pairwise data format. Is there a way to export it in cluster format? I.e. every line contain genes/protein within each network. For example image here contain 24 clusters, I'd like to have each cluster to have it's gene printed in one line.

network cytoscape • 1.7k views
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Hello!

Can you give more information about this format?

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Maybe this package can help you.

http://pynetconv.sourceforge.net

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Updated the OP. I want Cytoscape to output it.

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