This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Sample Exome Fastq Files

Hi all

I was wondering if there are some exome analysis FASTQ files out there?

Any help will be highly appreciated.

Thanks.

exome fastq
• 10,818 views • link
updated by Neilfws Neilfws • written by win win

1 answer

Out where? ;)

Yes, there are lots. One good source is the 1000 Genomes project. See this thread at SEQanswers for one method to get the exome files.

• 0 views • link
written by Neilfws Neilfws

Log in to answer this question.

More posts like this
  • Find common entries between VCF and ClinVar VCF
    written by win win
    hi all, i annotated a VCF file with ClinVar annotations and that worked fine. What I am interested to know is which entries in my …
  • Parse FASTQC data
    written by win win
    Hi all, I have a question regarding FASTQC . When we run FASTQC on FASTQ file it generates an HTML report. Is there any tool …
  • Common analysis methods for bioinformatics
    written by win win
    Hi all. I am trying to build a database of common statistical methods and especially used in clinical analysis and I was wondering if someone …
  • Compare VCF-VCF coverage
    written by win win
    <p>Hi all,</p> <p>I have a few different VCF files produced from three different variant detectors and I want to perform concondance analysis in a pairwise …
  • Storage Of Bam Files
    written by win win
    <p>hi all, we are creating an application and we want users to upload large <a href='http://samtools.sourceforge.net/SAM1.pdf'>BAM</a> files. I was wondering if there are any recommendations …
  • Annotate A Vcf File
    written by win win
    <p>hi all, i was wondering if someone could help. i wanted to know which annotation programs for VCF file especially the online ones. any place …
  • Whole Exome Data Positive Controls
    written by win win
    <p>Hi all. I am trying to validate a exome analysis pipeline and wanted to validate that. I wanted to know if someone know where I …
  • Compare Vcf Files
    written by win win
    <p>HI all, I was wondering if someone could help. What would be the best way to compare two VCF files? I was thinking of using …
  • Best Practices To Perform Exome Analysis (Illumina) Via Gatk
    written by win win
    <p>hi all, I am trying to conduct exome analysis on NGS exome data. the was sent from the Illumina platform as a sorted bam file.</p> …
  • 1000 Genomes Individual Genotype Data
    written by win win
    <p>I was wondering if someone could help. </p> <p>When using the 1000Genomes browser I came across this statement “1000 Genomes individual genotypes display” on the …