Any Reference Guided Assembly Tool Available Now

Could anyone suggest some reference guided assembly tools for cultivars' genome assembly?

reference assembly

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updated 13.8 years ago by Ali

• written 13.8 years ago by zhuwei.cug •

Please provide more context. What do you mean by 'cultivars'? Any plant? Specific ones? What reference genome do you have available and which species have you sequenced and hope to assemble?

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written 13.8 years ago by Malachi Griffith

1 answer

I think for your purpose Bowtie 2 is currently the best.

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written 13.8 years ago by Ali

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