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Noiseq Installation Error

Hi all, I am trying to install NOISeq package from Bioconductor using commands :

source("http://bioconductor.org/biocLite.R")
biocLite("NOISeq")

but there is an error when installing:

Warning message: package ‘NOISeq’ is not available (for R version 2.15.1)

but in the manual it is mentioned that NOISeq is available for R (>=2.0.3) so why is that? thanks in advance

• 4,771 views • link
updated by Armand • Armand • written by narges • narges

3 answers

Just upgrade the bioconductor (NOISeq is available only in Bioconductor version 1.11):

    source("http://bioconductor.org/biocLite.R")
    biocLite("BiocUpgrade")
    biocLite("NOISeq")
• 190 views • link
written by Armand • Armand

How is this useful now, when the answer was already known 4 months ago?

• 0 views • link
written by fo3c fo3c

You seem to have asked this on multiple sites.

Usually the answers will be found on the mailing list that corresponds to the tool that you are running. In this case the Bioconductor mailing list:

https://stat.ethz.ch/pipermail/bioconductor/2012-October/048479.html

• 0 views • link
written by Istvan Albert Istvan Albert

yes actually I got the answer there. I should have upgraded the biocInstaller package and now it works. You can delete the post it is not relevant. And thank you for the suggestion.

• 0 views • link
written by narges • narges

The best is to just add the answer if you found out what you needed from other sources - that way people can find their way later.

• 0 views • link
written by Istvan Albert Istvan Albert

The problem was due to the BiocInstaller package. So after upgrading it and reinstalling the NOISeq now it works. So the NOISeq is available in Bioconductor version 1.11.

• 1 views • link
written by narges • narges

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