This is a test version of Biostars. For the public version, visit https://www.biostars.org.
How do I solve "incompatible numba" while installing Scanpy?

I tried installing the Scanpy package on Jupyter but I got the the errors below;

ERROR: pynndescent 0.5.2 has requirement numba>=0.51.2, but you'll have numba 0.48.0 which is incompatible. ERROR: umap-learn 0.5.1 has requirement numba>=0.49, but you'll have numba 0.48.0 which is incompatible

When I tried to separately install an upgraded version of numba, I got the error below;

ERROR: Cannot uninstall 'llvmlite'. It is a distutils installed project and thus we cannot accurately determine which files belong to it which would lead to only a partial uninstall.

rna-seq alignment

0 answers

No answers yet.

Log in to answer this question.