DiffBind with duplicates
Hi I'm a novice for ChIP-seq and trying to use DiffBind.
I have ChIP-seq dat of WT and mutant1 for H3K27me3. Each genotype has 2 replicates.
When I try the differential analysis, I get an error message "2 groups and at least triplicates for each group is required".
I understand triplicates are kinda minimum with meaningful stats but as a preview I wonder if I can run with duplicates before I generate more replicates.
• 1,157 views
•
link
1 answer
got it. i need to use minMember option. thanks.
• 0 views
•
link
Log in to answer this question.