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is there a kind of package like Bio::Trace::ABIF in python?

I would like to align (map to reference), edit and export .ab1 files. However, if there isnt a such tool in python, any other language suggestion?

abif sanger perl python
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updated by Mensur Dlakic Mensur Dlakic • written by schagas • schagas

1 answer

Thanks Mrs Dlakic! but these tools just reading or parsing ab1 files.

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written by schagas • schagas

After you extract the sequence and quality scores from .ab1 files, alignments can be made using BioPython's own alignment module. Or use any other alignment module implemented in python.

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written by Mensur Dlakic Mensur Dlakic

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