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compare a list of RNA with RNA sequence in RFAM using python

Greetings dear scientists, I'm new in bioinformatics and I'm learning how to program with python. I was able to extract from the PDB database a set of RNA sequences as a Fasta file. Now I have to compare these RNA sequences with those in the Rfam database, in order to extract the already annotated RNAs. All this I have to do with the Python programming language. Could someone help me?

rna-seq rfam python
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written by phangou10 • phangou10

Could you provide some more information about the details of your files? File structure, format, etc.? This would help us with suggestions and sample scripts. I presume you are going to need a dictionary for this task, but I may be mistaken.

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written by ashishjayamohan • ashishjayamohan

Hi, I have a lot of séquences in Fasta file

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written by phangou10 • phangou10

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