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The name of variable in linear model and empirical bayes

I am learning how limma package works and diving into the world of bayesian statistics and linear algebra. Feeling frustrated because, I cannot fully explain what the these formula below mean. I am wondering whether my understanding of the name of variable is correct.

๐›ฝย ฬ‚_๐‘—๐‘˜=๐œŽ_๐‘—^2 ๐ถ^๐‘‡ (๐‘‹^๐‘‡ ๐‘‰_๐‘— ๐‘‹)^(โˆ’1) ๐ถ : linear model

(๐‘ _๐‘— )ย ฬƒ^2=(๐‘‘_0 ๐‘ _0^2+๐‘‘_๐‘— ๐‘ _๐‘—^2) / (๐‘‘_0+๐‘‘_๐‘— ) : empirical bayes

๐‘กย ฬƒ_๐‘—๐‘˜=๐›ฝย ฬ‚_๐‘—๐‘˜/(๐‘ข_๐‘—๐‘˜ ๐‘ ย ฬƒ_๐‘— ) : moderated-t

[ ๐›ฝย ฬ‚_๐‘—๐‘˜ --> maximum likelihood estimator ] [ ๐œŽ_๐‘—^2 --> variance ] [ X --> design matrix ] [ C --> contrast matrix ] [ V --> weight matrix ]

[ (๐‘ _๐‘— )ย ฬƒ^2 --> residual variance ] [ ๐‘‘_0, ๐‘‘_๐‘— --> degrees of freedom ] [ ๐‘ _0, ๐‘ _๐‘— --> variance ]

[ ๐‘กย ฬƒ_๐‘—๐‘˜ --> t value ] [ ๐‘ข_๐‘—๐‘˜ --> standard deviation ]

Are my understanding true ?

I would appreciate it if someone could answer. And very sorry for hard to see the formula.... Please see accurate formula in "http://www.uvm.edu/~rsingle/JournalClub/papers/Smyth-SAGMB-2004_eBayes+microarray.pdf"

r gene limma

Thank you for answering my question. Oh, I didn't know this community! All right, I will go and get information.

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