I am preparing a manuscript on the metagenomic analysis using QIIME2, and I'm facing issues with figure quality. My problem: I have QIIME2 visualization files …

Hello everyone, I’m working on a 16S rRNA microbiome project using Kraken2 with the SILVA database for taxonomic classification. After classification, I apply Bracken to …

Hi everyone! We've launched [MicrobiomePhylo][1], a cutting-edge web application designed to empower researchers in the field of microbiome analysis. Our platform offers a comprehensive suite …

Hi there!!! I am doing metagenomic analysis with metaphlan output data that show relative abundance s of the species. I am going to calculate the …

Hi community!!! I have profiled shotgun metagenome data with MetaPhlAn. Now, I want to do statistical analysis (e.g. alpha-, beta- diversity comparison, rarefaction graph, boxplots, …

I have one raw otu (**without rarefying**) about 18s rDNA from ocean samples. I only want to analyze the alpha and beta diversiyt of **phytoplankton** …

Hi all! I am new with Qiime2 and any kind of help would be much appreciated. I have abundance results for every taxonomy (phylum - …

I'm interested in alpha and beta diversity analysis based on read based and marker gene methods. Is there any recommendations on tools or pipeline that: …

Hi, I've ran metaphlan2 on shotgun metagenomics sequencing data and want to perform diversity (alpha and beta) analysis. Is there some tools allows calculating alpha …

Hi all, I am new in this kind of analysis. Maybe somebody could explain me (like for a child) what is exactly alpha-diversity, beta-diversity and …