change duplicate headers to unique headers in multifasta
I have a multi-fasta where many sequences have the same header. Something like this:
>Jerry_seinfeld
GCGCGCGCCG
>Jerry_seinfeld
GCGCATATATA
>Jerry_seinfeld
GCGCGATAAA
What I want to do is change the header every time it appears in duplicate, so I get something like this:
>Jerry_seinfeld_1
GCGCGCGCCG
>Jerry_seinfeld_2
GCGCATATATA
>Jerry_seinfeld_3
GCGCGATAAA
Any help is appreciated.
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by
ATpoint
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written
by
goatsrunfaster •
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written
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goatsrunfaster •
2 answers
Please browse biostars, e.g.
Add count numbers to headers in a fasta file or
Fasta header unique sequence or with a bit of imagination you can tweak this one
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