which expression levels should I choose in microarray?
Hi, I am looking for genes that have altered expression levels. When I use GEO database, I find multiple results for same gene within one dataset. Which of them should I use?
If I choose their average or highest value, how can I filter them?
Thanks for your help
1 answer
The R/BioConductor package limma has the avereps(). See a good answer at How to combine expression values of multiple probes for one gene? .
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