This is a test version of Biostars. For the public version, visit https://www.biostars.org.
transcriptome profiling in RNA-seq data

What are values for the arguments of data.category, data.type, and workflow.type needed for TCGAbiolinks::GDCquery() to obtain BAM files from transcriptome profiling such as RNA-seq data?

rna-seq bam

Do you have dbGap approval for data access? Asking this because bam files are controlled data and not open to public. BTW you can download by setting data.category to "Raw Sequencing Data".

0 answers

No answers yet.

Log in to answer this question.