Mapping clonotypes on UMAP

Hello! I have a suerat object and I would like to map the top 10 clonotypes in it. I am using the code

top10 <- head(VariableFeatures(Object$clonotype_id),10)

I keep getting the error, "Error in UseMethod(generic = "VariableFeatures", object = object) : no applicable method for 'VariableFeatures' applied to an object of class "factor"". Does anyone know how to pick out the top ten clonotypes? Thanks in advance!

seurat r rna-seq umap clonotype

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written 5.9 years ago by roberts •

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