Bulk RNA seq vs Sinlge Cell RNA seq correlation comparison
I want to compute the correlation between bulk-RNA-seq data(Nugen Ovation RNAseq V2 amplified libraries) to 10x UMI based single-cell RNA-seq data from the same sample. Is there a way to normalize sequencing depth between the two to explore correlations?
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Hi,
Do you mean compare scRNA-seq cell clusters against bulk-RNA seq?
See similar posts:
correlation between SCRNA-Seq and bulk RNAseq
How to compare the human single cell RNA-seq clusters with mouse bulk RNA-seq
António