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Evaluate genome annotation quality

If I have multiple annotations (gff/gtf files) for a genome, are there tools/metrics to evaluate which annotation is better?

annotation genome
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updated by hugo.avila 54 • | written by firestar 173

1 answer

hey, maybe try BEACON and/or BUSCO i think one (or both) of then will do what you want.

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written by hugo.avila 54

BUSCO is what I use at the moment and was wondering if there was something better. Something like AED scores. Thanks for BEACON. Never heard of that.

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written by firestar 173

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