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How to visualize skipped exon?

Hello!

I have two transcripts, and in one of them exon #7 is skipped. I really wish to visualize it. Is there any tool that can help me?

Thank you a lot in advance!

next-gen alternative splicing

What data is this from?

I meant is this RNA-seq data, ir some other type of NGS data?

You should also show an example of the data that you currently have, so that people can better help. Also, it would help to have explained your pipeline / processing steps so far.

1 answer

You should be able to view this using Sashimi plots in IGV.

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