This is a test version of Biostars. For the public version, visit https://www.biostars.org.
BacPipe problem running GUI

I tried running BacPipe GUI for WGS analysis using this command

sudo docker run -it --volume /home/abb/Bacpipe-1.2.6:/mahmed/mnt/mydata --env="DISPLAY" --env="QT_X11_NO_MITSHM=1" --volume="/tmp/.X11-unix:/tmp/.X11-unix:rw" mahmed/bacpipe python ./Pipeline.py unix

but it gives me following warnings 20

20-08-06 13:38:08,672 appJar:WARNING: Specified dimensions (780x800), less than requested dimensions (1015x850)
2020-08-06 13:38:08,673 appJar:WARNING: Invalid location: 293, -16 - ignoring

Currently I cant run it as full BacPipe GUI window is not being displayed.How can I see the last section of the BacPipe window so that I can run it.

genome assembly appjar wgs

0 answers

No answers yet.

Log in to answer this question.