MCMCtree GTR-G setup · Biostar

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MCMCtree GTR-G setup

Hi everyone!

I want to perform a molecular clock analysis using MCMCtree. I have already done that using HKY85 model. I was wondering if it is possible to perform the analysis using a GTR model. I found online a guide which did that, but if I use my mcmctree on my ctl file done following the tutorial, the program says "Error: Only HKY or simpler models are allowed..", maybe because it's not included in my PAML package version (which is the last one: 4.9i). Can you help me?

mcmctree molecular clock gtr+g gtr clock

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written 6.1 years ago by RiccPicc •

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