Hello,

I have replications of a chipseq experiment. All have been processed and peak called. Now I want to combine those bed files that only areas which have a peak in at least X percent of the files are called. Is there a tool which has a feature like that?

Example:

A.bed:
1 5 20

B.bed:
1 10 15

D.bed:
1 25 30

With X = 100% > no peak called
With X = 50% > 1 10 15

Thanks in advance for your ideas and suggestions!