metagenomic bacterial identify
Hello. I have a metagenome study. What do I have to do to identify the bacterial species in this bacterial cluster. Sequencing data was generated using fastq format 16S rRNA genes.
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SurdanBurasi •
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What have done so far? What is fastS format?
it can't be fastS that I wrote wrong. the right one is FASTQ.I am so sorry :(( I actively annotate new generation sequencing data. But I will work for the first time in the field of metagenomes.
Have you gone through online materials that are available. There are so many bioinformatics analysis guides available. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2593568/, https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3351745/, https://www.researchgate.net/post/can_someone_guide_me_in_processing_the_metagenomic_16s_rRNA_data_which_is_in_fastq_format
You should atleast make an effort first.
check mothur and/or qiime tutorials.