This is a test version of Biostars. For the public version, visit https://www.biostars.org.
HIPPIE Protein Database Query

I'm interested to do PPI network analysis using HIPPIE database. On the home-page of HIPPIE it states the following:

A threshold on the HIPPIE confidence score can be chosen. The user can either specify a custom value between 0 and 1 or choose a predefined confidence level: medium confidence (0.63 - second quartile of the HIPPIE score distribution) or high confidence (0.73 - third quartile). If both custom and predefined thresholds are selected, the higher one is applied.

At what threshold score should I select my protein interacting partners? Is >= 0.5 a reasonable good threshold ?

software error gene
• 1,049 views • link
written by prithvi.mastermind • prithvi.mastermind

0 answers

No answers yet.

Log in to answer this question.

More posts like this