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samtools view problem in HyDRA

I downloaded quasitools from github and I tried to run HyDRA for HIV genotyping, but I am getting the following error when trying to run it:

Error: samtools view returned the following output:
b'dyld: Library not loaded: @rpath/libcrypto.1.0.0.dylib
Referenced from: /PathToAnaconda/samtools\n  Reason: image not found'

I read somewhere that uninstalling samtools separately and reinstalling it might fix the problem, but I am still getting the same issue.

It would be great if anyone has any advice on how to fix this problem.

Thank you

hydra samtools hiv

Is HyDRA available via conda? If it is, the best option would be to install that and samtools using conda.

Yes it is. Yes when I tried reinstalling samtools, I did so using conda.

1 answer

Can you create a new environment and try?

conda create -n newenv samtools hydra

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