Hi, I downloaded several RNA-Seq raw data (fastq files) from different studies. Then I submitted them to a RNA-Seq pipeline that I developped and that …
Hi, I'm trying to do a meta-analysis of 4 studies (microarrays and RNA-seq). I'm using the rma function from the **metafor** package, with the DerSimonian-Laird …
Hi, I am using GEO2R to generate deferentially expressed genes between two conditions. However, after defining the groups and viewing the top 250 genes, all …
Hi all, During Differential gene expression analysis of RNASeq data (DESEq2 or Cufdiff) which is best method to filter differentially expressed genes? Should I go …
Hi, There are more than 17,000 genes (probes) differentially expressed (adjusted p-value < 0.05) among 48,000 genes (probes) in a microarray analysis (by limma R …
<p>Hi, I want to perform an anova analysis for identifying differentially expressed genes. Should I scale the data using quantile normalization or median absolute deviation …