Dna database and analysis tool using hadoop
Hello everyone, My name is Lokesh and i have to make a dna database and analysis tool using hadoop as my university project. Can anyone kindly tell me, what is the best method to store complete DNA sequences ( 3 billion base pairs approx.) in hadoop ecosystem? Any help will be greatly appreciated.
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lokeshp14cs24 •
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Dear Lokesh,
There were some discussions going on in the past, just two threads that you may find interesting:
Why is Hadoop not used a lot in bio-informatics?
Hadoop InputFormat for FASTA files?
etc.