This is a test version of Biostars. For the public version, visit https://www.biostars.org.
DIFFICULTY INSTALLING JASS

I am having difficulty installing JASS for GWAS analysis. I tried both on my windows and on Linux platform but it still showed an error message.

On Windows;

ERROR: Command errored out with exit status 128: git clone -q https://gitlab.pasteur.fr/statistical-genetics/jass 'C:\Users\Hp\AppData\Local\Temp\pip-req-build-2zdofz2m' Check the logs for full command output.

On Putty ;

Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-nakf2pxo-build/
You are using pip version 8.1.1, however version 20.0.2 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.

NB; My pip has already been upgraded to the latest.

software error

Check the logs for full command output.

lets do that then.

1 answer

First thing check the logs. After that, try pip install --upgrade setuptools

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