Hi all, I have downloaded the TPM data for brain tissue from GTeX portal (https://www.gtexportal.org/home/datasets). I want the corresponding eQTLS data. Do anyone know where …
Hi there, I am trying to using GTEx RNA-seq V8 data to analyze the gene expression difference between human subcutaneous and visceral adipose tissue by …
Hi! Can someone explain what is the difference between *.egenes.txt.gz and *.signif_variant_gene_pairs.txt.gz files? They are from GTEx v8 single-tissue eQTL data. Also I would want …
We have RNA seq `transcripts per million(TPM)` values for all genes in a tumor patient sample. However there was no sequencing done for normal samples …
Hi, I want to normalize the gene counts from GTEX using variance stabilizing transformation (VST) but I'm confused about which variables I should include in …