how to get a male reference when using cnvkit.py batch command
If the -y option was not specified when constructing the reference (e.g. cnvkit.py batch ...), then you have a female reference, and I want to know how to get a male reference when using cnvkit batch command
• 1,097 views
•
link
updated
by
officialoxybreath •
•
written
by
guofengwang123 •
•
written
by
guofengwang123 •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
help with germline analysis using cnvkit
written by ww22runner •
-
gender determination and chrX CN calls
written by erikt •
-
CNVkit: call sex chr - germline analysis
written by emma.a •
-
CNVkit with tumor only bam and flat reference
written by youki •
-
how to understand output form from CNVkit
written by prosium •
-
how to adjust the length of y axis
written by shengkeyuan111 •
-
Question about run cnvkit on DNAnexus
written by qyang •
-
CNVkit assuming male for female samples
written by bracha.avigdor •
-
CNVkit - Proper Way to Generate Accurate Sex Chromosome Predictions
written by fongchunchan •
-
Interpretation of sex chromosome ploidy using CNVKit
written by andcl93 •
