get my specific genome sequence and gene sequence
According to WGS data, I finally obtain my vcf files (SNP and INDEL calling) by GATK4. Now, I'd like to obtain my personalized genome sequence (such as TAGCTGAA....). After that, I'd like to obtain all my gene sequences from my genome sequence. I found FastaAlternateReferenceMaker seems suitable for this task? But I am not sure. Could anyone tell me how to do that? Thank you in advance.
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panxingxin16 •
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Did you get your own genome sequenced?