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STAR-Fusion result cant find in IGV viewer

i run rna sequence (1.fastq, 2.fastq) by STAR-fusion

Then, i find out RNA fusion gene

ex) CREBBP^ENSG00000005339.8 chr16:3799628:- PDILT^ENSG00000169340.5 chr16:20410629:-

However, when i open IGV and upload bam file, i cant view match region by fusion gene.

rna-seq

However, when i open IGV and upload bam file, i cant view match region by fusion gene.

because...? I suggest you invest some effort both into the quality and visual appearance of your post. We have a code option(the botton with 10101 to highlight code and data examples. Thank you.

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