Hello,

Can somebody please help me understand what the command here is doing:

JOBID=0
PID=164655
command=/home/CLSTR/user/software/seqmule/bin/secondary/../../bin/secondary/worker /home/CLSTR/user/data/sample/seqmule.02262020.153477.logs 31 "/home/CLSTR/user/software/seqmule/bin/secondary/../../bin/seqmule stats -tmpdir /tmp -ref /home/CLSTR/user/software/seqmule/bin/secondary/../../database/human_g1k_v37.fasta  -jmem 1750m  -jexe java  -t 2 -c-vcf Sample_result/Sample_bwamem.merge.realn.recal.0_gatk_hc.extract.vcf,Sample_result/Sample_bwamem.merge.recal.0_gatk_hc.extract.vcf -p Sample_result/Sample.extract "
dependency=29,30
message=Extract consensus calls
nCPU_requested=1
status=error

The log 31 file is empty. What does "-t", "-c-vcf" and "-p" mean? Help is much appreciated! Many thanks!